Difference between revisions of "Background-individuals"
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== Individuals use in UGP Background files == | == Individuals use in UGP Background files == | ||
| + | |||
| + | * Total of 221 individuals | ||
==== GBR ==== | ==== GBR ==== | ||
| − | HG00096 | + | |
| − | HG00097 | + | * Individual - 1000Genome Filename |
| − | HG00099 | + | |
| − | HG00100 | + | HG00096 SRR081241 |
| − | HG00101 | + | HG00097 SRR765989 |
| − | HG00102 | + | HG00099 SRR765993 |
| − | HG00103 | + | HG00100 SRR099966 |
| − | HG00105 | + | HG00101 SRR070802 |
| − | HG00106 | + | HG00102 SRR081224 |
| − | HG00107 | + | HG00103 SRR077475 |
| − | HG00108 | + | HG00105 SRR711354 |
| − | HG00109 | + | HG00106 SRR702073 |
| − | HG00110 | + | HG00107 SRR077391 |
| − | HG00111 | + | HG00108 ERR034502 |
| − | HG00112 | + | HG00109 ERR034562 |
| − | HG00113 | + | HG00110 ERR034563 |
| − | HG00114 | + | HG00111 ERR031963 |
| − | HG00115 | + | HG00112 SRR702072 |
| − | HG00116 | + | HG00113 ERR032009 |
| − | HG00117 | + | HG00114 SRR077349 |
| − | HG00118 | + | HG00115 SRR702074 |
| − | HG00119 | + | HG00116 SRR099965 |
| − | HG00120 | + | HG00117 SRR099956 |
| − | HG00121 | + | HG00118 SRR702075 |
| − | HG00122 | + | HG00119 SRR099967 |
| − | HG00123 | + | HG00120 SRR099961 |
| − | HG00124 | + | HG00121 ERR031964 |
| − | HG00125 | + | HG00122 SRR711355 |
| − | HG00126 | + | HG00123 SRR099955 |
| − | HG00127 | + | HG00124 SRR099959 |
| − | HG00128 | + | HG00125 ERR031932 |
| − | HG00129 | + | HG00126 SRR707196 |
| − | HG00130 | + | HG00127 SRR070516 |
| − | HG00131 | + | HG00128 SRR718072 |
| − | HG00132 | + | HG00129 SRR701480 |
| − | HG00133 | + | HG00130 SRR707198 |
| − | HG00136 | + | HG00131 SRR098439 |
| − | HG00137 | + | HG00132 SRR768526 |
| − | HG00138 | + | HG00133 SRR099969 |
| − | HG00139 | + | HG00136 ERR031933 |
| − | HG00140 | + | HG00137 ERR031934 |
| − | HG00141 | + | HG00138 ERR031935 |
| − | HG00142 | + | HG00139 ERR031936 |
| − | HG00143 | + | HG00140 ERR031965 |
| − | HG00145 | + | HG00141 SRR764730 |
| − | HG00146 | + | HG00142 SRR764704 |
| − | HG00148 | + | HG00143 SRR765995 |
| − | HG00149 | + | HG00145 SRR099957 |
| − | HG00150 | + | HG00146 SRR316801 |
| − | HG00151 | + | HG00148 SRR764729 |
| − | HG00155 | + | HG00149 SRR711356 |
| − | HG00157 | + | HG00150 SRR701483 |
| − | HG00159 | + | HG00151 SRR766045 |
| − | HG00160 | + | HG00155 SRR316803 |
| − | HG00231 | + | HG00157 SRR099960 |
| − | HG00232 | + | HG00159 SRR098442 |
| − | HG00233 | + | HG00160 SRR107017 |
| − | HG00234 | + | HG00231 SRR708376 |
| − | HG00235 | + | HG00232 ERR031966 |
| − | HG00236 | + | HG00233 SRR070796 |
| − | HG00237 | + | HG00234 SRR768527 |
| − | HG00238 | + | HG00235 SRR766049 |
| − | HG00239 | + | HG00236 ERR032010 |
| − | HG00240 | + | HG00237 ERR032011 |
| − | HG00242 | + | HG00238 SRR070772 |
| − | HG00243 | + | HG00239 SRR099958 |
| − | HG00244 | + | HG00240 SRR070779 |
| − | HG00245 | + | HG00242 SRR099962 |
| − | HG00246 | + | HG00243 SRR099964 |
| − | HG00250 | + | HG00244 SRR098443 |
| − | HG00251 | + | HG00245 SRR316802 |
| − | HG00252 | + | HG00246 ERR031967 |
| − | HG00253 | + | HG00250 ERR031968 |
| − | HG00254 | + | HG00251 ERR031969 |
| − | HG00255 | + | HG00252 ERR031970 |
| − | HG00256 | + | HG00253 ERR031938 |
| − | HG00257 | + | HG00254 ERR032012 |
| − | HG00258 | + | HG00255 SRR099963 |
| − | HG00259 | + | HG00256 ERR032013 |
| − | HG00260 | + | HG00257 ERR032032 |
| − | HG00261 | + | HG00258 SRR099954 |
| − | HG00262 | + | HG00259 ERR031971 |
| − | HG00263 | + | HG00260 ERR031972 |
| − | HG00265 | + | HG00261 ERR031973 |
| − | HG01334 | + | HG00262 SRR107024 |
| − | HG01789 | + | HG00263 ERR031939 |
| − | HG01790 | + | HG00265 SRR099968 |
| − | HG02215 | + | HG01334 ERR032001 |
| + | HG01789 SRR764712 | ||
| + | HG01790 SRR702064 | ||
| + | HG02215 ERR047816 | ||
==== CEU ==== | ==== CEU ==== | ||
| − | NA06984 | + | |
| − | NA06985 | + | * Individual - 1000Genome Filename |
| − | NA06986 | + | |
| − | NA06989 | + | NA06984 SRR098409 |
| − | NA06994 | + | NA06985 SRR709972 |
| − | NA07000 | + | NA06986 SRR107048 |
| − | NA07037 | + | NA06989 SRR098417 |
| − | NA07048 | + | NA06994 SRR070819 |
| − | NA07056 | + | NA07000 SRR766039 |
| − | NA07347 | + | NA07037 ERR034542 |
| − | NA07357 | + | NA07048 SRR099452 |
| − | NA10847 | + | NA07056 SRR764718 |
| − | NA10851 | + | NA07347 SRR098372 |
| − | NA11829 | + | NA07357 SRR764690 |
| − | NA11830 | + | NA10847 SRR070823 |
| − | NA11831 | + | NA10851 SRR766044 |
| − | NA11832 | + | NA11829 SRR710128 |
| − | NA11840 | + | NA11830 SRR766026 |
| − | NA11843 | + | NA11831 SRR709975 |
| − | NA11881 | + | NA11832 SRR766003 |
| − | NA11892 | + | NA11840 SRR070809 |
| − | NA11893 | + | NA11843 SRR098408 |
| − | NA11894 | + | NA11881 SRR766021 |
| − | NA11918 | + | NA11892 ERR034518 |
| − | NA11919 | + | NA11893 ERR034519 |
| − | NA11920 | + | NA11894 ERR034543 |
| − | NA11930 | + | NA11918 SRR107047 |
| − | NA11931 | + | NA11919 SRR099458 |
| − | NA11932 | + | NA11920 SRR099453 |
| − | NA11933 | + | NA11930 SRR098416 |
| − | NA11992 | + | NA11931 ERR034520 |
| − | NA11994 | + | NA11932 ERR034544 |
| − | NA11995 | + | NA11933 ERR034545 |
| − | NA12003 | + | NA11992 SRR701474 |
| − | NA12004 | + | NA11994 SRR701475 |
| − | NA12005 | + | NA11995 SRR766010 |
| − | NA12006 | + | NA12003 SRR766061 |
| − | NA12043 | + | NA12004 SRR766059 |
| − | NA12044 | + | NA12005 SRR718067 |
| − | NA12045 | + | NA12006 SRR716422 |
| − | NA12046 | + | NA12043 SRR716424 |
| − | NA12058 | + | NA12044 SRR766060 |
| − | NA12144 | + | NA12045 SRR099456 |
| − | NA12154 | + | NA12046 SRR742200 |
| − | NA12155 | + | NA12058 SRR099457 |
| − | NA12156 | + | NA12144 SRR766058 |
| − | NA12234 | + | NA12154 SRR702067 |
| − | NA12249 | + | NA12155 SRR702068 |
| − | NA12272 | + | NA12156 SRR764691 |
| − | NA12273 | + | NA12234 SRR716435 |
| − | NA12275 | + | NA12249 SRR070798 |
| − | NA12282 | + | NA12272 SRR070826 |
| − | NA12283 | + | NA12273 SRR070835 |
| − | NA12286 | + | NA12275 SRR078851 |
| − | NA12287 | + | NA12282 SRR231269 |
| − | NA12340 | + | NA12283 SRR077389 |
| − | NA12341 | + | NA12286 SRR081262 |
| − | NA12342 | + | NA12287 ERR034546 |
| − | NA12347 | + | NA12340 SRR098418 |
| − | NA12348 | + | NA12341 SRR098398 |
| − | NA12399 | + | NA12342 SRR098414 |
| − | NA12400 | + | NA12347 ERR034521 |
| − | NA12413 | + | NA12348 ERR034522 |
| − | NA12414 | + | NA12399 SRR099451 |
| − | NA12489 | + | NA12400 SRR316955 |
| − | NA12546 | + | NA12413 ERR034524 |
| − | NA12716 | + | NA12414 SRR764693 |
| − | NA12717 | + | NA12489 SRR702069 |
| − | NA12718 | + | NA12546 ERR034525 |
| − | NA12748 | + | NA12716 SRR081274 |
| − | NA12749 | + | NA12717 SRR071177 |
| − | NA12750 | + | NA12718 SRR071132 |
| − | NA12751 | + | NA12748 SRR098402 |
| − | NA12760 | + | NA12749 ERR034526 |
| − | NA12761 | + | NA12750 SRR794550 |
| − | NA12762 | + | NA12751 SRR071139 |
| − | NA12763 | + | NA12760 SRR081251 |
| − | NA12775 | + | NA12761 SRR081267 |
| − | NA12776 | + | NA12762 SRR718076 |
| − | NA12777 | + | NA12763 SRR081230 |
| − | NA12778 | + | NA12775 ERR034547 |
| − | NA12812 | + | NA12776 ERR034548 |
| − | NA12813 | + | NA12777 ERR034549 |
| − | NA12814 | + | NA12778 ERR034550 |
| − | NA12815 | + | NA12812 SRR715913 |
| − | NA12827 | + | NA12813 SRR718078 |
| − | NA12828 | + | NA12814 SRR715914 |
| − | NA12829 | + | NA12815 SRR716646 |
| − | NA12830 | + | NA12827 ERR034527 |
| − | NA12842 | + | NA12828 ERR034528 |
| − | NA12843 | + | NA12829 SRR316957 |
| − | NA12872 | + | NA12830 SRR098415 |
| − | NA12873 | + | NA12842 SRR107049 |
| − | NA12874 | + | NA12843 SRR098413 |
| − | NA12878 | + | NA12872 SRR716647 |
| − | NA12889 | + | NA12873 SRR702070 |
| − | NA12890 | + | NA12874 SRR764692 |
| − | NA12891 | + | NA12878 SRR098401 |
| − | NA12892 | + | NA12889 SRR107050 |
| + | NA12890 SRR189814 | ||
| + | NA12891 SRR098359 | ||
| + | NA12892 ERR034529 | ||
==== FIN ==== | ==== FIN ==== | ||
| − | HG00176 | + | |
| − | HG00177 | + | * Individual - 1000Genome Filename |
| − | HG00178 | + | |
| − | HG00181 | + | HG00176 SRR350395 |
| − | HG00182 | + | HG00177 SRR764754 |
| − | HG00183 | + | HG00178 SRR070773 |
| − | HG00185 | + | HG00181 SRR070813 |
| − | HG00186 | + | HG00182 SRR070800 |
| − | HG00187 | + | HG00183 SRR070824 |
| − | HG00188 | + | HG00185 SRR070814 |
| − | HG00189 | + | HG00186 SRR081249 |
| − | HG00190 | + | HG00187 SRR070821 |
| − | HG00269 | + | HG00188 SRR070795 |
| − | HG00272 | + | HG00189 SRR070792 |
| − | HG00288 | + | HG00190 SRR070790 |
| − | HG00290 | + | HG00269 SRR764680 |
| − | HG00304 | + | HG00272 SRR101140 |
| − | HG00306 | + | HG00288 ERR250258 |
| − | HG00308 | + | HG00290 ERR250260 |
| − | HG00311 | + | HG00304 SRR794682 |
| − | HG00357 | + | HG00306 SRR101098 |
| − | HG00361 | + | HG00308 SRR316817 |
| − | HG00365 | + | HG00311 SRR101138 |
| − | HG00366 | + | HG00357 SRR101090 |
| − | HG00367 | + | HG00361 SRR350398 |
| − | HG00368 | + | HG00365 SRR764682 |
| − | HG00369 | + | HG00366 SRR101115 |
| − | HG00371 | + | HG00367 SRR101130 |
| − | HG00372 | + | HG00368 SRR107018 |
| − | HG00373 | + | HG00369 SRR101132 |
| − | HG00377 | + | HG00371 SRR101139 |
| − | HG00379 | + | HG00372 SRR101142 |
| − | HG00380 | + | HG00373 SRR101116 |
| − | HG00384 | + | HG00377 SRR100153 |
| + | HG00379 SRR101134 | ||
| + | HG00380 SRR100151 | ||
| + | HG00384 SRR101127 | ||
Latest revision as of 15:49, 3 September 2014
Individuals use in UGP Background files
- Total of 221 individuals
GBR
- Individual - 1000Genome Filename
HG00096 SRR081241 HG00097 SRR765989 HG00099 SRR765993 HG00100 SRR099966 HG00101 SRR070802 HG00102 SRR081224 HG00103 SRR077475 HG00105 SRR711354 HG00106 SRR702073 HG00107 SRR077391 HG00108 ERR034502 HG00109 ERR034562 HG00110 ERR034563 HG00111 ERR031963 HG00112 SRR702072 HG00113 ERR032009 HG00114 SRR077349 HG00115 SRR702074 HG00116 SRR099965 HG00117 SRR099956 HG00118 SRR702075 HG00119 SRR099967 HG00120 SRR099961 HG00121 ERR031964 HG00122 SRR711355 HG00123 SRR099955 HG00124 SRR099959 HG00125 ERR031932 HG00126 SRR707196 HG00127 SRR070516 HG00128 SRR718072 HG00129 SRR701480 HG00130 SRR707198 HG00131 SRR098439 HG00132 SRR768526 HG00133 SRR099969 HG00136 ERR031933 HG00137 ERR031934 HG00138 ERR031935 HG00139 ERR031936 HG00140 ERR031965 HG00141 SRR764730 HG00142 SRR764704 HG00143 SRR765995 HG00145 SRR099957 HG00146 SRR316801 HG00148 SRR764729 HG00149 SRR711356 HG00150 SRR701483 HG00151 SRR766045 HG00155 SRR316803 HG00157 SRR099960 HG00159 SRR098442 HG00160 SRR107017 HG00231 SRR708376 HG00232 ERR031966 HG00233 SRR070796 HG00234 SRR768527 HG00235 SRR766049 HG00236 ERR032010 HG00237 ERR032011 HG00238 SRR070772 HG00239 SRR099958 HG00240 SRR070779 HG00242 SRR099962 HG00243 SRR099964 HG00244 SRR098443 HG00245 SRR316802 HG00246 ERR031967 HG00250 ERR031968 HG00251 ERR031969 HG00252 ERR031970 HG00253 ERR031938 HG00254 ERR032012 HG00255 SRR099963 HG00256 ERR032013 HG00257 ERR032032 HG00258 SRR099954 HG00259 ERR031971 HG00260 ERR031972 HG00261 ERR031973 HG00262 SRR107024 HG00263 ERR031939 HG00265 SRR099968 HG01334 ERR032001 HG01789 SRR764712 HG01790 SRR702064 HG02215 ERR047816
CEU
- Individual - 1000Genome Filename
NA06984 SRR098409 NA06985 SRR709972 NA06986 SRR107048 NA06989 SRR098417 NA06994 SRR070819 NA07000 SRR766039 NA07037 ERR034542 NA07048 SRR099452 NA07056 SRR764718 NA07347 SRR098372 NA07357 SRR764690 NA10847 SRR070823 NA10851 SRR766044 NA11829 SRR710128 NA11830 SRR766026 NA11831 SRR709975 NA11832 SRR766003 NA11840 SRR070809 NA11843 SRR098408 NA11881 SRR766021 NA11892 ERR034518 NA11893 ERR034519 NA11894 ERR034543 NA11918 SRR107047 NA11919 SRR099458 NA11920 SRR099453 NA11930 SRR098416 NA11931 ERR034520 NA11932 ERR034544 NA11933 ERR034545 NA11992 SRR701474 NA11994 SRR701475 NA11995 SRR766010 NA12003 SRR766061 NA12004 SRR766059 NA12005 SRR718067 NA12006 SRR716422 NA12043 SRR716424 NA12044 SRR766060 NA12045 SRR099456 NA12046 SRR742200 NA12058 SRR099457 NA12144 SRR766058 NA12154 SRR702067 NA12155 SRR702068 NA12156 SRR764691 NA12234 SRR716435 NA12249 SRR070798 NA12272 SRR070826 NA12273 SRR070835 NA12275 SRR078851 NA12282 SRR231269 NA12283 SRR077389 NA12286 SRR081262 NA12287 ERR034546 NA12340 SRR098418 NA12341 SRR098398 NA12342 SRR098414 NA12347 ERR034521 NA12348 ERR034522 NA12399 SRR099451 NA12400 SRR316955 NA12413 ERR034524 NA12414 SRR764693 NA12489 SRR702069 NA12546 ERR034525 NA12716 SRR081274 NA12717 SRR071177 NA12718 SRR071132 NA12748 SRR098402 NA12749 ERR034526 NA12750 SRR794550 NA12751 SRR071139 NA12760 SRR081251 NA12761 SRR081267 NA12762 SRR718076 NA12763 SRR081230 NA12775 ERR034547 NA12776 ERR034548 NA12777 ERR034549 NA12778 ERR034550 NA12812 SRR715913 NA12813 SRR718078 NA12814 SRR715914 NA12815 SRR716646 NA12827 ERR034527 NA12828 ERR034528 NA12829 SRR316957 NA12830 SRR098415 NA12842 SRR107049 NA12843 SRR098413 NA12872 SRR716647 NA12873 SRR702070 NA12874 SRR764692 NA12878 SRR098401 NA12889 SRR107050 NA12890 SRR189814 NA12891 SRR098359 NA12892 ERR034529
FIN
- Individual - 1000Genome Filename
HG00176 SRR350395 HG00177 SRR764754 HG00178 SRR070773 HG00181 SRR070813 HG00182 SRR070800 HG00183 SRR070824 HG00185 SRR070814 HG00186 SRR081249 HG00187 SRR070821 HG00188 SRR070795 HG00189 SRR070792 HG00190 SRR070790 HG00269 SRR764680 HG00272 SRR101140 HG00288 ERR250258 HG00290 ERR250260 HG00304 SRR794682 HG00306 SRR101098 HG00308 SRR316817 HG00311 SRR101138 HG00357 SRR101090 HG00361 SRR350398 HG00365 SRR764682 HG00366 SRR101115 HG00367 SRR101130 HG00368 SRR107018 HG00369 SRR101132 HG00371 SRR101139 HG00372 SRR101142 HG00373 SRR101116 HG00377 SRR100153 HG00379 SRR101134 HG00380 SRR100151 HG00384 SRR101127
