MAKER Wiki maker_wiki https://weatherby.genetics.utah.edu/MAKER/wiki/index.php/Main_Page MediaWiki 1.33.1 first-letter Media Special Talk User User talk MAKER Wiki MAKER Wiki talk File File talk MediaWiki MediaWiki talk Template Template talk Help Help talk Category Category talk 0 1 578 577 2019-11-07T04:18:26Z Cholt 5 wikitext text/x-wiki Welcome to the MAKER Wiki. This is a place to find documentation, and details about the MAKER Genome Annotation Pipeline: ==Getting started with MAKER== * [http://www.yandell-lab.org/software/maker.html Download and License MAKER] * [[MAKER Tutorial for WGS Assembly and Annotation Winter School 2018]] * [[MAKER Tutorial for GMOD Online Training 2014]] (includes instructional video and slides) * [[MAKER tutorial for GMOD Malaysia]] * [http://efish.zoology.msu.edu/2015/02/10/annotate.html MAKER in the AWS Cloud Tutorial (Gallant Lab - MSU)] ==MAKER on CyVerse (previously iPlant)== * [https://pods.iplantcollaborative.org/wiki/display/TUT/MAKER+2.31.9+with+CCTOOLS+Jetstream+Tutorial MAKER at CyVerse] ==Creating a species specific repeat library== * [[Repeat Library Construction-Basic]] * [[Repeat Library Construction-Advanced]] ==Getting Help with MAKER== * [[FAQ]] *[https://groups.google.com/forum/?fromgroups#!forum/maker-devel MAKER developers list archive] * [[MAKER developers list]] ==Other MAKER use cases== * [[Updating annotations in light of new data]] * [[Your Genome Project Start to Finish--UNDER CONSTRUCTION]] * [[Comparing annotations from different annotation pipelines--UNDER CONSTRUCTION]] ==MAKER odds and ends== * [[The MAKER control files explained]] == Media Wiki Stuff == Consult the [//meta.wikimedia.org/wiki/Help:Contents User's Guide] for information on using the wiki software. * [//www.mediawiki.org/wiki/Manual:Configuration_settings Configuration settings list] * [//www.mediawiki.org/wiki/Manual:FAQ MediaWiki FAQ] * [https://lists.wikimedia.org/mailman/listinfo/mediawiki-announce MediaWiki release mailing list] * [//www.mediawiki.org/wiki/Localisation#Translation_resources Localise MediaWiki for your language] egtmegyewzp696kzv4l1x2ug2kexkwt