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- 17:51, 11 February 2015 diff hist +81 FreeBayes Variant Protocol →Alignment
- 17:48, 11 February 2015 diff hist +11 FreeBayes Variant Protocol →Alignment
- 17:48, 11 February 2015 diff hist -11 FreeBayes Variant Protocol →Alignment
- 17:47, 11 February 2015 diff hist +115 FreeBayes Variant Protocol →Alignment
- 17:46, 11 February 2015 diff hist +314 FreeBayes Variant Protocol →Alignment
- 17:41, 11 February 2015 diff hist -49 FreeBayes Variant Protocol →Indexing
- 17:40, 11 February 2015 diff hist -156 FreeBayes Variant Protocol →Indexing
- 17:39, 11 February 2015 diff hist +10 FreeBayes Variant Protocol
- 17:39, 11 February 2015 diff hist +13,774 N FreeBayes Variant Protocol Created page with "= Alternate UGP Variant Calling Protocol = Feb. 2015 Variant Calling Pipeline Version 1.0.0 ===Software Versions=== *FastQforward is an ultra parallelized NGS pipeline, cre..."
- 16:08, 11 February 2015 diff hist -1 Utah Genome Project →Protocol Developement
- 05:11, 11 February 2015 diff hist +136 Utah Genome Project →Protocol Developement
- 05:03, 11 February 2015 diff hist +106 Utah Genome Project →Protocol Developement
- 05:02, 11 February 2015 diff hist +242 Utah Genome Project →UGP Variant Calling
- 04:57, 11 February 2015 diff hist +64 Utah Genome Project →Variant Analysis Pipeline
- 04:55, 11 February 2015 diff hist 0 Utah Genome Project →Variant Analysis Pipeline
- 04:55, 11 February 2015 diff hist +359 Utah Genome Project →Variant Analysis Pipeline
- 04:50, 11 February 2015 diff hist +705 N UGP Variant Protocol Created page with "* UGP Variant Protocol Version 1.2.1 * UGP Variant Protocol Version 1.1.6 * UGP_Variant_Pipeline_1.0.6 | ..."
- 04:49, 11 February 2015 diff hist 0 Utah Genome Project
- 04:49, 11 February 2015 diff hist 0 UGP Variant Pipeline current
- 04:48, 11 February 2015 diff hist +438 Utah Genome Project →Utah Genome Project =
- 04:40, 11 February 2015 diff hist -40 Utah Genome Project
- 06:01, 2 February 2015 diff hist -12 UGP Variant Pipeline 1.2.1 →Data Source
- 05:59, 2 February 2015 diff hist +544 UGP Variant Pipeline 1.2.1 →Data Source
- 20:30, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →Software Versions
- 20:29, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →Utah Genome Project
- 18:14, 28 January 2015 diff hist 0 UGP Variant Pipeline 1.2.1 →Utah Genome Project
- 17:13, 28 January 2015 diff hist +71 UGP Variant Pipeline
- 17:12, 28 January 2015 diff hist -2 Utah Genome Project
- 16:59, 28 January 2015 diff hist +337 UGP Variant Pipeline 1.2.1 →CombineVarients
- 16:55, 28 January 2015 diff hist +271 UGP Variant Pipeline 1.2.1 →Variant Calling
- 16:44, 28 January 2015 diff hist +485 UGP Variant Pipeline 1.2.1 →Variant Calling
- 16:37, 28 January 2015 diff hist +409 UGP Variant Pipeline 1.2.1 →Variant Calling
- 16:30, 28 January 2015 diff hist 0 UGP Variant Pipeline 1.2.1 →HaplotypeCaller
- 16:30, 28 January 2015 diff hist +146 UGP Variant Pipeline 1.2.1 →HaplotypeCaller
- 16:27, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →BaseRecalibration & PrintReads
- 16:27, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →BaseRecalibration & PrintReads
- 16:27, 28 January 2015 diff hist +1 UGP Variant Pipeline 1.2.1 →BaseRecalibration & PrintReads
- 16:26, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →BaseRecalibration & PrintReads
- 16:26, 28 January 2015 diff hist +274 UGP Variant Pipeline 1.2.1 →BaseRecalibration & PrintReads
- 16:22, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →Local Realignment of Indels
- 16:21, 28 January 2015 diff hist +1 UGP Variant Pipeline 1.2.1 →Local Realignment of Indels
- 16:21, 28 January 2015 diff hist +122 UGP Variant Pipeline 1.2.1 →Local Realignment of Indels
- 16:16, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →BAM Quality Control
- 16:15, 28 January 2015 diff hist +80 UGP Variant Pipeline 1.2.1 →BAM Quality Control
- 16:14, 28 January 2015 diff hist -8 UGP Variant Pipeline 1.2.1 →BAM Quality Control
- 16:11, 28 January 2015 diff hist +22 UGP Variant Pipeline 1.2.1 →Merge lane level BAMs to individual
- 16:08, 28 January 2015 diff hist 0 UGP Variant Pipeline 1.2.1 →BAM File Analyses and Processing
- 16:07, 28 January 2015 diff hist +1 UGP Variant Pipeline 1.2.1 →Utah Genome Project
- 16:07, 28 January 2015 diff hist +308 UGP Variant Pipeline 1.2.1 →BAM File Analyses and Processing
- 16:04, 28 January 2015 diff hist +34 UGP Variant Pipeline 1.2.1 →Mark Duplicates
- 16:01, 28 January 2015 diff hist -1 UGP Variant Pipeline 1.2.1 →Software Versions
- 15:59, 28 January 2015 diff hist +11,134 N UGP Variant Pipeline 1.2.1 Created page with "= Utah Genome Project = Nov. 2014 Variant Calling Pipeline Version 1.2.1 ===Software Versions=== *[https://github.com/srynobio/cApTUrE cApTUrE] is a lightweight NGS pipe..."
- 23:00, 13 November 2014 diff hist +123 UGP Variant Pipeline 1.1.6 →Software Versions current
- 22:59, 13 November 2014 diff hist +71 UGP Variant Pipeline
- 22:59, 13 November 2014 diff hist +11,085 N UGP Variant Pipeline 1.1.6 Created page with "= Utah Genome Project = Nov. 2014 Variant Calling Pipeline Version 1.1.6 ===Software Versions=== *GenomeAnalysisTK-3.3-2 *Picard : Version: 1.112 *FastQC v0.10.1 *Samtoo..."
- 13:13, 7 November 2014 diff hist 0 UGP Variant Pipeline 1.0.6 →Utah Genome Project current
- 13:13, 7 November 2014 diff hist 0 UGP Variant Pipeline
- 13:12, 7 November 2014 diff hist +71 UGP Variant Pipeline
- 13:12, 7 November 2014 diff hist +11,085 N UGP Variant Pipeline 1.0.6 Created page with "= Utah Genome Project = Sep. 2014 Variant Calling Pipeline Version 1.0.6 ===Software Versions=== *GenomeAnalysisTK-3.3-2 *Picard : Version: 1.112 *FastQC v0.10.1 *Samtoo..."
- 15:07, 16 September 2014 diff hist +51 UGP Variant Pipeline 1.0.5 →Data Source current
- 17:22, 8 September 2014 diff hist +31 UGP Variant Pipeline 1.0.5 →HaplotypeCaller
- 17:15, 8 September 2014 diff hist +71 UGP Variant Pipeline
- 17:14, 8 September 2014 diff hist +147 UGP Variant Pipeline 1.0.5 →BAM Quality Control
- 17:11, 8 September 2014 diff hist -2 UGP Variant Pipeline 1.0.5 →FastQ File Analyses
- 17:10, 8 September 2014 diff hist +4 UGP Variant Pipeline 1.0.5 →FastQ File Analyses
- 17:10, 8 September 2014 diff hist -1 UGP Variant Pipeline 1.0.5 →FastQ File Analyses
- 17:09, 8 September 2014 diff hist -23 UGP Variant Pipeline 1.0.5 →Data Source
- 17:08, 8 September 2014 diff hist -5 UGP Variant Pipeline 1.0.5 →Software Versions
- 17:07, 8 September 2014 diff hist +8 UGP Variant Pipeline 1.0.5 →Data Source
- 17:05, 8 September 2014 diff hist 0 UGP Variant Pipeline 1.0.5 →Data Source
- 17:04, 8 September 2014 diff hist +10,752 N UGP Variant Pipeline 1.0.5 Created page with "= Utah Genome Project = Sep. 2014 Variant Calling Pipeline Version 1.0.5 ===Software Versions=== **GenomeAnalysisTK-3.3-2 **Picard : Version: 1.112 **FastQC v0.10.1 **Sa..."
- 15:49, 3 September 2014 diff hist +377 Background-individuals →Individuals use in UGP Background files current
- 15:49, 3 September 2014 diff hist +36 Background-individuals →Individuals use in UGP Background files
- 15:48, 3 September 2014 diff hist +992 Background-individuals →CEU
- 15:48, 3 September 2014 diff hist +917 Background-individuals →GBR
- 22:25, 29 August 2014 diff hist +28 Background-individuals →Individuals use in UGP Background files
- 22:24, 29 August 2014 diff hist +3 UGP Variant Pipeline 1.0.4 →Data Source current
- 21:59, 29 August 2014 diff hist +1 UGP Variant Pipeline 1.0.4 →Utah Genome Project
- 21:58, 29 August 2014 diff hist +132 UGP Variant Pipeline 1.0.4 →Data Source
- 21:57, 29 August 2014 diff hist +1,237 Background-individuals →Individuals use in UGP Background files
- 21:54, 29 August 2014 diff hist +842 N Background-individuals Created page with "== Individuals use in UGP Background files == GBR HG00096 HG00097 HG00099 HG00100 HG00101 HG00102 HG00103 HG00105 HG00106 HG00107 HG00108 HG00109 HG00110 HG0011..."
- 19:38, 25 August 2014 diff hist +6 UGP Variant Pipeline 1.0.4 →Data Source
- 21:08, 21 August 2014 diff hist -15 UGP Variant Pipeline 1.0.4 →Base Quality Score Recalibration & PrintReads
- 21:07, 21 August 2014 diff hist -16 UGP Variant Pipeline 1.0.4 →Software Versions
- 20:58, 21 August 2014 diff hist 0 UGP Variant Pipeline
- 20:58, 21 August 2014 diff hist +71 UGP Variant Pipeline
- 20:57, 21 August 2014 diff hist +10,364 N UGP Variant Pipeline 1.0.4 Created page with "= Utah Genome Project = Aug. 2014 Variant Calling Pipeline Version 1.0.4 ===Software Versions=== **GenomeAnalysisTK-3.3-2 **Picard : Version: 1.112 **FastQC v0.10.1 **Sa..."
- 20:55, 21 August 2014 diff hist -9 UGP Variant Pipeline 1.0.3 →BAM File Analyses and Processing current
- 20:54, 21 August 2014 diff hist -105 UGP Variant Pipeline 1.0.3 →BAM Quality Control
- 20:35, 21 August 2014 diff hist +27 UGP Variant Pipeline 1.0.3 →Mark Duplicates
- 20:33, 21 August 2014 diff hist +1 UGP Variant Pipeline 1.0.3 →FastQ File Analyses
- 20:33, 21 August 2014 diff hist -114 UGP Variant Pipeline 1.0.3 →FastQ File Analyses
- 16:45, 21 August 2014 diff hist 0 UGP Variant Pipeline 1.0.3 →Utah Genome Project
- 16:45, 21 August 2014 diff hist -25 UGP Variant Pipeline 1.0.3 →BAM Quality Control
- 16:44, 21 August 2014 diff hist +161 UGP Variant Pipeline 1.0.3 →BAM Quality Control
- 16:43, 21 August 2014 diff hist +4 UGP Variant Pipeline 0.0.3 →BAM Quality Control current
- 16:43, 21 August 2014 diff hist +26 UGP Variant Pipeline 0.0.3 →BAM Quality Control
- 16:42, 21 August 2014 diff hist -48 UGP Variant Pipeline 0.0.3 →BAM Quality Control
- 21:15, 15 August 2014 diff hist 0 UGP Variant Pipeline 1.0.3 →Data Source
- 21:15, 15 August 2014 diff hist 0 UGP Variant Pipeline 1.0.3 →Data Source