Difference between revisions of "Background-individuals"

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== Individuals use in UGP Background files ==
 
== Individuals use in UGP Background files ==
 +
 +
* Total of 221 individuals
  
 
==== GBR ====
 
==== GBR ====
  HG00096
+
 
  HG00097
+
* Individual - 1000Genome Filename
  HG00099
+
 
  HG00100
+
  HG00096 SRR081241
  HG00101
+
  HG00097 SRR765989
  HG00102
+
  HG00099 SRR765993
  HG00103
+
  HG00100 SRR099966
  HG00105
+
  HG00101 SRR070802
  HG00106
+
  HG00102 SRR081224
  HG00107
+
  HG00103 SRR077475
  HG00108
+
  HG00105 SRR711354
  HG00109
+
  HG00106 SRR702073
  HG00110
+
  HG00107 SRR077391
  HG00111
+
  HG00108 ERR034502
  HG00112
+
  HG00109 ERR034562
  HG00113
+
  HG00110 ERR034563
  HG00114
+
  HG00111 ERR031963
  HG00115
+
  HG00112 SRR702072
  HG00116
+
  HG00113 ERR032009
  HG00117
+
  HG00114 SRR077349
  HG00118
+
  HG00115 SRR702074
  HG00119
+
  HG00116 SRR099965
  HG00120
+
  HG00117 SRR099956
  HG00121
+
  HG00118 SRR702075
  HG00122
+
  HG00119 SRR099967
  HG00123
+
  HG00120 SRR099961
  HG00124
+
  HG00121 ERR031964
  HG00125
+
  HG00122 SRR711355
  HG00126
+
  HG00123 SRR099955
  HG00127
+
  HG00124 SRR099959
  HG00128
+
  HG00125 ERR031932
  HG00129
+
  HG00126 SRR707196
  HG00130
+
  HG00127 SRR070516
  HG00131
+
  HG00128 SRR718072
  HG00132
+
  HG00129 SRR701480
  HG00133
+
  HG00130 SRR707198
  HG00136
+
  HG00131 SRR098439
  HG00137
+
  HG00132 SRR768526
  HG00138
+
  HG00133 SRR099969
  HG00139
+
  HG00136 ERR031933
  HG00140
+
  HG00137 ERR031934
  HG00141
+
  HG00138 ERR031935
  HG00142
+
  HG00139 ERR031936
  HG00143
+
  HG00140 ERR031965
  HG00145
+
  HG00141 SRR764730
  HG00146
+
  HG00142 SRR764704
  HG00148
+
  HG00143 SRR765995
  HG00149
+
  HG00145 SRR099957
  HG00150
+
  HG00146 SRR316801
  HG00151
+
  HG00148 SRR764729
  HG00155
+
  HG00149 SRR711356
  HG00157
+
  HG00150 SRR701483
  HG00159
+
  HG00151 SRR766045
  HG00160
+
  HG00155 SRR316803
  HG00231
+
  HG00157 SRR099960
  HG00232
+
  HG00159 SRR098442
  HG00233
+
  HG00160 SRR107017
  HG00234
+
  HG00231 SRR708376
  HG00235
+
  HG00232 ERR031966
  HG00236
+
  HG00233 SRR070796
  HG00237
+
  HG00234 SRR768527
  HG00238
+
  HG00235 SRR766049
  HG00239
+
  HG00236 ERR032010
  HG00240
+
  HG00237 ERR032011
  HG00242
+
  HG00238 SRR070772
  HG00243
+
  HG00239 SRR099958
  HG00244
+
  HG00240 SRR070779
  HG00245
+
  HG00242 SRR099962
  HG00246
+
  HG00243 SRR099964
  HG00250
+
  HG00244 SRR098443
  HG00251
+
  HG00245 SRR316802
  HG00252
+
  HG00246 ERR031967
  HG00253
+
  HG00250 ERR031968
  HG00254
+
  HG00251 ERR031969
  HG00255
+
  HG00252 ERR031970
  HG00256
+
  HG00253 ERR031938
  HG00257
+
  HG00254 ERR032012
  HG00258
+
  HG00255 SRR099963
  HG00259
+
  HG00256 ERR032013
  HG00260
+
  HG00257 ERR032032
  HG00261
+
  HG00258 SRR099954
  HG00262
+
  HG00259 ERR031971
  HG00263
+
  HG00260 ERR031972
  HG00265
+
  HG00261 ERR031973
  HG01334
+
  HG00262 SRR107024
  HG01789
+
  HG00263 ERR031939
  HG01790
+
  HG00265 SRR099968
  HG02215
+
  HG01334 ERR032001
 +
  HG01789 SRR764712
 +
  HG01790 SRR702064
 +
  HG02215 ERR047816
  
 
==== CEU ====
 
==== CEU ====
  NA06984
+
 
  NA06985
+
* Individual - 1000Genome Filename
  NA06986
+
  NA06989
+
  NA06984 SRR098409
  NA06994
+
  NA06985 SRR709972
  NA07000
+
  NA06986 SRR107048
  NA07037
+
  NA06989 SRR098417
  NA07048
+
  NA06994 SRR070819
  NA07056
+
  NA07000 SRR766039
  NA07347
+
  NA07037 ERR034542
  NA07357
+
  NA07048 SRR099452
  NA10847
+
  NA07056 SRR764718
  NA10851
+
  NA07347 SRR098372
  NA11829
+
  NA07357 SRR764690
  NA11830
+
  NA10847 SRR070823
  NA11831
+
  NA10851 SRR766044
  NA11832
+
  NA11829 SRR710128
  NA11840
+
  NA11830 SRR766026
  NA11843
+
  NA11831 SRR709975
  NA11881
+
  NA11832 SRR766003
  NA11892
+
  NA11840 SRR070809
  NA11893
+
  NA11843 SRR098408
  NA11894
+
  NA11881 SRR766021
  NA11918
+
  NA11892 ERR034518
  NA11919
+
  NA11893 ERR034519
  NA11920
+
  NA11894 ERR034543
  NA11930
+
  NA11918 SRR107047
  NA11931
+
  NA11919 SRR099458
  NA11932
+
  NA11920 SRR099453
  NA11933
+
  NA11930 SRR098416
  NA11992
+
  NA11931 ERR034520
  NA11994
+
  NA11932 ERR034544
  NA11995
+
  NA11933 ERR034545
  NA12003
+
  NA11992 SRR701474
  NA12004
+
  NA11994 SRR701475
  NA12005
+
  NA11995 SRR766010
  NA12006
+
  NA12003 SRR766061
  NA12043
+
  NA12004 SRR766059
  NA12044
+
  NA12005 SRR718067
  NA12045
+
  NA12006 SRR716422
  NA12046
+
  NA12043 SRR716424
  NA12058
+
  NA12044 SRR766060
  NA12144
+
  NA12045 SRR099456
  NA12154
+
  NA12046 SRR742200
  NA12155
+
  NA12058 SRR099457
  NA12156
+
  NA12144 SRR766058
  NA12234
+
  NA12154 SRR702067
  NA12249
+
  NA12155 SRR702068
  NA12272
+
  NA12156 SRR764691
  NA12273
+
  NA12234 SRR716435
  NA12275
+
  NA12249 SRR070798
  NA12282
+
  NA12272 SRR070826
  NA12283
+
  NA12273 SRR070835
  NA12286
+
  NA12275 SRR078851
  NA12287
+
  NA12282 SRR231269
  NA12340
+
  NA12283 SRR077389
  NA12341
+
  NA12286 SRR081262
  NA12342
+
  NA12287 ERR034546
  NA12347
+
  NA12340 SRR098418
  NA12348
+
  NA12341 SRR098398
  NA12399
+
  NA12342 SRR098414
  NA12400
+
  NA12347 ERR034521
  NA12413
+
  NA12348 ERR034522
  NA12414
+
  NA12399 SRR099451
  NA12489
+
  NA12400 SRR316955
  NA12546
+
  NA12413 ERR034524
  NA12716
+
  NA12414 SRR764693
  NA12717
+
  NA12489 SRR702069
  NA12718
+
  NA12546 ERR034525
  NA12748
+
  NA12716 SRR081274
  NA12749
+
  NA12717 SRR071177
  NA12750
+
  NA12718 SRR071132
  NA12751
+
  NA12748 SRR098402
  NA12760
+
  NA12749 ERR034526
  NA12761
+
  NA12750 SRR794550
  NA12762
+
  NA12751 SRR071139
  NA12763
+
  NA12760 SRR081251
  NA12775
+
  NA12761 SRR081267
  NA12776
+
  NA12762 SRR718076
  NA12777
+
  NA12763 SRR081230
  NA12778
+
  NA12775 ERR034547
  NA12812
+
  NA12776 ERR034548
  NA12813
+
  NA12777 ERR034549
  NA12814
+
  NA12778 ERR034550
  NA12815
+
  NA12812 SRR715913
  NA12827
+
  NA12813 SRR718078
  NA12828
+
  NA12814 SRR715914
  NA12829
+
  NA12815 SRR716646
  NA12830
+
  NA12827 ERR034527
  NA12842
+
  NA12828 ERR034528
  NA12843
+
  NA12829 SRR316957
  NA12872
+
  NA12830 SRR098415
  NA12873
+
  NA12842 SRR107049
  NA12874
+
  NA12843 SRR098413
  NA12878
+
  NA12872 SRR716647
  NA12889
+
  NA12873 SRR702070
  NA12890
+
  NA12874 SRR764692
  NA12891
+
  NA12878 SRR098401
  NA12892
+
  NA12889 SRR107050
 +
  NA12890 SRR189814
 +
  NA12891 SRR098359
 +
  NA12892 ERR034529
  
 
==== FIN ====
 
==== FIN ====
  HG00176
+
 
  HG00177
+
* Individual - 1000Genome Filename
  HG00178
+
 
  HG00181
+
  HG00176 SRR350395
  HG00182
+
  HG00177 SRR764754
  HG00183
+
  HG00178 SRR070773
  HG00185
+
  HG00181 SRR070813
  HG00186
+
  HG00182 SRR070800
  HG00187
+
  HG00183 SRR070824
  HG00188
+
  HG00185 SRR070814
  HG00189
+
  HG00186 SRR081249
  HG00190
+
  HG00187 SRR070821
  HG00269
+
  HG00188 SRR070795
  HG00272
+
  HG00189 SRR070792
  HG00288
+
  HG00190 SRR070790
  HG00290
+
  HG00269 SRR764680
  HG00304
+
  HG00272 SRR101140
  HG00306
+
  HG00288 ERR250258
  HG00308
+
  HG00290 ERR250260
  HG00311
+
  HG00304 SRR794682
  HG00357
+
  HG00306 SRR101098
  HG00361
+
  HG00308 SRR316817
  HG00365
+
  HG00311 SRR101138
  HG00366
+
  HG00357 SRR101090
  HG00367
+
  HG00361 SRR350398
  HG00368
+
  HG00365 SRR764682
  HG00369
+
  HG00366 SRR101115
  HG00371
+
  HG00367 SRR101130
  HG00372
+
  HG00368 SRR107018
  HG00373
+
  HG00369 SRR101132
  HG00377
+
  HG00371 SRR101139
  HG00379
+
  HG00372 SRR101142
  HG00380
+
  HG00373 SRR101116
  HG00384
+
  HG00377 SRR100153
 +
  HG00379 SRR101134
 +
  HG00380 SRR100151
 +
  HG00384 SRR101127

Latest revision as of 15:49, 3 September 2014

Individuals use in UGP Background files

  • Total of 221 individuals

GBR

  • Individual - 1000Genome Filename
HG00096	SRR081241
HG00097	SRR765989
HG00099	SRR765993
HG00100	SRR099966
HG00101	SRR070802
HG00102	SRR081224
HG00103	SRR077475
HG00105	SRR711354
HG00106	SRR702073
HG00107	SRR077391
HG00108	ERR034502
HG00109	ERR034562
HG00110	ERR034563
HG00111	ERR031963
HG00112	SRR702072
HG00113	ERR032009
HG00114	SRR077349
HG00115	SRR702074
HG00116	SRR099965
HG00117	SRR099956
HG00118	SRR702075
HG00119	SRR099967
HG00120	SRR099961
HG00121	ERR031964
HG00122	SRR711355
HG00123	SRR099955
HG00124	SRR099959
HG00125	ERR031932
HG00126	SRR707196
HG00127	SRR070516
HG00128	SRR718072
HG00129	SRR701480
HG00130	SRR707198
HG00131	SRR098439
HG00132	SRR768526
HG00133	SRR099969
HG00136	ERR031933
HG00137	ERR031934
HG00138	ERR031935
HG00139	ERR031936
HG00140	ERR031965
HG00141	SRR764730
HG00142	SRR764704
HG00143	SRR765995
HG00145	SRR099957
HG00146	SRR316801
HG00148	SRR764729
HG00149	SRR711356
HG00150	SRR701483
HG00151	SRR766045
HG00155	SRR316803
HG00157	SRR099960
HG00159	SRR098442
HG00160	SRR107017
HG00231	SRR708376
HG00232	ERR031966
HG00233	SRR070796
HG00234	SRR768527
HG00235	SRR766049
HG00236	ERR032010
HG00237	ERR032011
HG00238	SRR070772
HG00239	SRR099958
HG00240	SRR070779
HG00242	SRR099962
HG00243	SRR099964
HG00244	SRR098443
HG00245	SRR316802
HG00246	ERR031967
HG00250	ERR031968
HG00251	ERR031969
HG00252	ERR031970
HG00253	ERR031938
HG00254	ERR032012
HG00255	SRR099963
HG00256	ERR032013
HG00257	ERR032032
HG00258	SRR099954
HG00259	ERR031971
HG00260	ERR031972
HG00261	ERR031973
HG00262	SRR107024
HG00263	ERR031939
HG00265	SRR099968
HG01334	ERR032001
HG01789	SRR764712
HG01790	SRR702064
HG02215	ERR047816

CEU

  • Individual - 1000Genome Filename
NA06984	SRR098409
NA06985	SRR709972
NA06986	SRR107048
NA06989	SRR098417
NA06994	SRR070819
NA07000	SRR766039
NA07037	ERR034542
NA07048	SRR099452
NA07056	SRR764718
NA07347	SRR098372
NA07357	SRR764690
NA10847	SRR070823
NA10851	SRR766044
NA11829	SRR710128
NA11830	SRR766026
NA11831	SRR709975
NA11832	SRR766003
NA11840	SRR070809
NA11843	SRR098408
NA11881	SRR766021
NA11892	ERR034518
NA11893	ERR034519
NA11894	ERR034543
NA11918	SRR107047
NA11919	SRR099458
NA11920	SRR099453
NA11930	SRR098416
NA11931	ERR034520
NA11932	ERR034544
NA11933	ERR034545
NA11992	SRR701474
NA11994	SRR701475
NA11995	SRR766010
NA12003	SRR766061
NA12004	SRR766059
NA12005	SRR718067
NA12006	SRR716422
NA12043	SRR716424
NA12044	SRR766060
NA12045	SRR099456
NA12046	SRR742200
NA12058	SRR099457
NA12144	SRR766058
NA12154	SRR702067
NA12155	SRR702068
NA12156	SRR764691
NA12234	SRR716435
NA12249	SRR070798
NA12272	SRR070826
NA12273	SRR070835
NA12275	SRR078851
NA12282	SRR231269
NA12283	SRR077389
NA12286	SRR081262
NA12287	ERR034546
NA12340	SRR098418
NA12341	SRR098398
NA12342	SRR098414
NA12347	ERR034521
NA12348	ERR034522
NA12399	SRR099451
NA12400	SRR316955
NA12413	ERR034524
NA12414	SRR764693
NA12489	SRR702069
NA12546	ERR034525
NA12716	SRR081274
NA12717	SRR071177
NA12718	SRR071132
NA12748	SRR098402
NA12749	ERR034526
NA12750	SRR794550
NA12751	SRR071139
NA12760	SRR081251
NA12761	SRR081267
NA12762	SRR718076
NA12763	SRR081230
NA12775	ERR034547
NA12776	ERR034548
NA12777	ERR034549
NA12778	ERR034550
NA12812	SRR715913
NA12813	SRR718078
NA12814	SRR715914
NA12815	SRR716646
NA12827	ERR034527
NA12828	ERR034528
NA12829	SRR316957
NA12830	SRR098415
NA12842	SRR107049
NA12843	SRR098413
NA12872	SRR716647
NA12873	SRR702070
NA12874	SRR764692
NA12878	SRR098401
NA12889	SRR107050
NA12890	SRR189814
NA12891	SRR098359
NA12892	ERR034529

FIN

  • Individual - 1000Genome Filename
HG00176	SRR350395
HG00177	SRR764754
HG00178	SRR070773
HG00181	SRR070813
HG00182	SRR070800
HG00183	SRR070824
HG00185	SRR070814
HG00186	SRR081249
HG00187	SRR070821
HG00188	SRR070795
HG00189	SRR070792
HG00190	SRR070790
HG00269	SRR764680
HG00272	SRR101140
HG00288	ERR250258
HG00290	ERR250260
HG00304	SRR794682
HG00306	SRR101098
HG00308	SRR316817
HG00311	SRR101138
HG00357	SRR101090
HG00361	SRR350398
HG00365	SRR764682
HG00366	SRR101115
HG00367	SRR101130
HG00368	SRR107018
HG00369	SRR101132
HG00371	SRR101139
HG00372	SRR101142
HG00373	SRR101116
HG00377	SRR100153
HG00379	SRR101134
HG00380	SRR100151
HG00384	SRR101127