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  • ...proteins and transcripts. We also have output reports from the program [[InterProScan]] (a domain finder) ran on the MAKER proteins and a [[BLAST]] report of hom ...protein domain information to the final annotations using a report from [[InterProScan]]. This is down using the following scripts:
    79 KB (12,566 words) - 03:29, 21 May 2014
  • ...output reports from the program [https://www.ebi.ac.uk/interpro/about.html InterProScan] (a domain finder) ran on the MAKER proteins and a BLAST report of homology This is an example command line for running InterProScan (you don't need to run it, it's just for reference):
    86 KB (13,640 words) - 15:31, 7 February 2018
  • *''ipr_update_gff'' - Takes InterproScan (iptrscan) output and maps domain IDs and GO terms to the Dbxref and Ontolo
    85 KB (13,361 words) - 19:54, 18 February 2014